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<a href="observer__dynamics_8h.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno">    1</span>&#160;<span class="comment">/* -------------------------------------------------------------------------*</span></div><div class="line"><a name="l00002"></a><span class="lineno">    2</span>&#160;<span class="comment">*                               SPHinXsys                                   *</span></div><div class="line"><a name="l00003"></a><span class="lineno">    3</span>&#160;<span class="comment">* --------------------------------------------------------------------------*</span></div><div class="line"><a name="l00004"></a><span class="lineno">    4</span>&#160;<span class="comment">* SPHinXsys (pronunciation: s&#39;finksis) is an acronym from Smoothed Particle *</span></div><div class="line"><a name="l00005"></a><span class="lineno">    5</span>&#160;<span class="comment">* Hydrodynamics for industrial compleX systems. It provides C++ APIs for    *</span></div><div class="line"><a name="l00006"></a><span class="lineno">    6</span>&#160;<span class="comment">* physical accurate simulation and aims to model coupled industrial dynamic *</span></div><div class="line"><a name="l00007"></a><span class="lineno">    7</span>&#160;<span class="comment">* systems including fluid, solid, multi-body dynamics and beyond with SPH   *</span></div><div class="line"><a name="l00008"></a><span class="lineno">    8</span>&#160;<span class="comment">* (smoothed particle hydrodynamics), a meshless computational method using  *</span></div><div class="line"><a name="l00009"></a><span class="lineno">    9</span>&#160;<span class="comment">* particle discretization.                                                  *</span></div><div class="line"><a name="l00010"></a><span class="lineno">   10</span>&#160;<span class="comment">*                                                                           *</span></div><div class="line"><a name="l00011"></a><span class="lineno">   11</span>&#160;<span class="comment">* SPHinXsys is partially funded by German Research Foundation               *</span></div><div class="line"><a name="l00012"></a><span class="lineno">   12</span>&#160;<span class="comment">* (Deutsche Forschungsgemeinschaft) DFG HU1527/6-1, HU1527/10-1             *</span></div><div class="line"><a name="l00013"></a><span class="lineno">   13</span>&#160;<span class="comment">* and HU1527/12-1.                                                          *</span></div><div class="line"><a name="l00014"></a><span class="lineno">   14</span>&#160;<span class="comment">*                                                                           *</span></div><div class="line"><a name="l00015"></a><span class="lineno">   15</span>&#160;<span class="comment">* Portions copyright (c) 2017-2020 Technical University of Munich and       *</span></div><div class="line"><a name="l00016"></a><span class="lineno">   16</span>&#160;<span class="comment">* the authors&#39; affiliations.                                                *</span></div><div class="line"><a name="l00017"></a><span class="lineno">   17</span>&#160;<span class="comment">*                                                                           *</span></div><div class="line"><a name="l00018"></a><span class="lineno">   18</span>&#160;<span class="comment">* Licensed under the Apache License, Version 2.0 (the &quot;License&quot;); you may   *</span></div><div class="line"><a name="l00019"></a><span class="lineno">   19</span>&#160;<span class="comment">* not use this file except in compliance with the License. You may obtain a *</span></div><div class="line"><a name="l00020"></a><span class="lineno">   20</span>&#160;<span class="comment">* copy of the License at http://www.apache.org/licenses/LICENSE-2.0.        *</span></div><div class="line"><a name="l00021"></a><span class="lineno">   21</span>&#160;<span class="comment">*                                                                           *</span></div><div class="line"><a name="l00022"></a><span class="lineno">   22</span>&#160;<span class="comment">* --------------------------------------------------------------------------*/</span></div><div class="line"><a name="l00034"></a><span class="lineno">   34</span>&#160;<span class="preprocessor">#pragma once</span></div><div class="line"><a name="l00035"></a><span class="lineno">   35</span>&#160;</div><div class="line"><a name="l00036"></a><span class="lineno">   36</span>&#160;<span class="preprocessor">#include &quot;all_particle_dynamics.h&quot;</span></div><div class="line"><a name="l00037"></a><span class="lineno">   37</span>&#160;</div><div class="line"><a name="l00038"></a><span class="lineno">   38</span>&#160;<span class="keyword">namespace </span><a class="code" href="namespace_s_p_h.html">SPH</a></div><div class="line"><a name="l00039"></a><span class="lineno">   39</span>&#160;{</div><div class="line"><a name="l00040"></a><span class="lineno">   40</span>&#160;    <span class="keyword">namespace </span>observer_dynamics</div><div class="line"><a name="l00041"></a><span class="lineno">   41</span>&#160;    {</div><div class="line"><a name="l00042"></a><span class="lineno">   42</span>&#160;        <span class="keyword">template</span> &lt;<span class="keyword">class</span> ObserverParticlesType, <span class="keyword">class</span> TargetParticlesType&gt;</div><div class="line"><a name="l00043"></a><span class="lineno">   43</span>&#160;        <span class="keyword">using</span> InterpolationDynamics </div><div class="line"><a name="l00044"></a><span class="lineno">   44</span>&#160;            = ParticleDynamicsContact&lt;SPHBody, ObserverParticlesType, BaseMaterial, SPHBody, TargetParticlesType&gt;;</div><div class="line"><a name="l00045"></a><span class="lineno">   45</span>&#160;</div><div class="line"><a name="l00046"></a><span class="lineno">   46</span>&#160;        <span class="keyword">template</span> &lt;<span class="keyword">class</span> TargetParticlesType&gt;</div><div class="line"><a name="l00047"></a><span class="lineno">   47</span>&#160;        <span class="keyword">using</span> ObservationDynamics </div><div class="line"><a name="l00048"></a><span class="lineno">   48</span>&#160;            = ParticleDynamicsContact&lt;SPHBody, BaseParticles, BaseMaterial,SPHBody, TargetParticlesType, BaseMaterial&gt;;</div><div class="line"><a name="l00049"></a><span class="lineno">   49</span>&#160;</div><div class="line"><a name="l00054"></a><span class="lineno">   54</span>&#160;        <span class="keyword">template</span> &lt;<span class="keyword">class </span>DataType, <span class="keyword">class </span>TargetParticlesType, <span class="keyword">class </span>TargetDataType,</div><div class="line"><a name="l00055"></a><span class="lineno">   55</span>&#160;            StdLargeVec&lt;TargetDataType&gt; TargetParticlesType:: * TrgtDataMemPtr, DataType TargetDataType:: * TrgtMemPtr&gt;</div><div class="line"><a name="l00056"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_quantity.html">   56</a></span>&#160;        <span class="keyword">class </span><a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_quantity.html">ObservingAQuantity</a> : <span class="keyword">public</span> <a class="code" href="class_s_p_h_1_1_particle_dynamics_contact.html">ObservationDynamics</a>&lt;TargetParticlesType&gt;</div><div class="line"><a name="l00057"></a><span class="lineno">   57</span>&#160;        {</div><div class="line"><a name="l00058"></a><span class="lineno">   58</span>&#160;        <span class="keyword">protected</span>:</div><div class="line"><a name="l00060"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_quantity.html#ac7c700df625fac6dfe6999301e4f83ad">   60</a></span>&#160;            StdLargeVec&lt;DataType&gt;  <a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_quantity.html#ac7c700df625fac6dfe6999301e4f83ad">observed_quantities_</a>;</div><div class="line"><a name="l00061"></a><span class="lineno">   61</span>&#160;</div><div class="line"><a name="l00062"></a><span class="lineno">   62</span>&#160;            <span class="keyword">virtual</span> <span class="keywordtype">void</span> ContactInteraction(<span class="keywordtype">size_t</span> index_particle_i, Real dt = 0.0)<span class="keyword"> override</span></div><div class="line"><a name="l00063"></a><span class="lineno">   63</span>&#160;<span class="keyword">            </span>{</div><div class="line"><a name="l00064"></a><span class="lineno">   64</span>&#160;                DataType observed_quantity(0);</div><div class="line"><a name="l00065"></a><span class="lineno">   65</span>&#160;                Real ttl_weight(0);</div><div class="line"><a name="l00066"></a><span class="lineno">   66</span>&#160;</div><div class="line"><a name="l00067"></a><span class="lineno">   67</span>&#160;                <span class="keywordflow">for</span> (<span class="keywordtype">size_t</span> k = 0; k &lt; this-&gt;<a class="code" href="class_s_p_h_1_1_particle_dynamics_with_contact_configurations.html#a8a73fe1f7d8c22453a3c91c702b18796">contact_configuration_</a>.size(); ++k)</div><div class="line"><a name="l00068"></a><span class="lineno">   68</span>&#160;                {</div><div class="line"><a name="l00069"></a><span class="lineno">   69</span>&#160;                    TargetParticlesType* target_particles = this-&gt;contact_particles_[k];</div><div class="line"><a name="l00070"></a><span class="lineno">   70</span>&#160;                    StdLargeVec&lt;TargetDataType&gt;&amp; target_data = target_particles-&gt;*TrgtDataMemPtr;</div><div class="line"><a name="l00071"></a><span class="lineno">   71</span>&#160;</div><div class="line"><a name="l00072"></a><span class="lineno">   72</span>&#160;                    <a class="code" href="class_s_p_h_1_1_neighborhood.html">Neighborhood</a>&amp; contact_neighborhood </div><div class="line"><a name="l00073"></a><span class="lineno">   73</span>&#160;                        = this-&gt;<a class="code" href="class_s_p_h_1_1_particle_dynamics_with_contact_configurations.html#a8a73fe1f7d8c22453a3c91c702b18796">contact_configuration_</a>[k][index_particle_i];</div><div class="line"><a name="l00074"></a><span class="lineno">   74</span>&#160;                    <a class="code" href="namespace_s_p_h.html#a65e5947f1eaddb0ada85cefd554b8183">KernelValueList</a>&amp; kernel_value_list = contact_neighborhood.kernel_value_list_;</div><div class="line"><a name="l00075"></a><span class="lineno">   75</span>&#160;                    <a class="code" href="namespace_s_p_h.html#aa1b1a469a853a78ec95f6bf7b3ded9f4">CommonRelationList</a>&amp; contact_common_relations = contact_neighborhood.common_relation_list_;</div><div class="line"><a name="l00076"></a><span class="lineno">   76</span>&#160;                    <span class="keywordflow">for</span> (<span class="keywordtype">size_t</span> n = 0; n != contact_neighborhood.<a class="code" href="class_s_p_h_1_1_neighborhood.html#a1e2d0d9c7af09e2ee0e58903b171902d">current_size_</a>; ++n)</div><div class="line"><a name="l00077"></a><span class="lineno">   77</span>&#160;                    {</div><div class="line"><a name="l00078"></a><span class="lineno">   78</span>&#160;                        <a class="code" href="class_s_p_h_1_1_common_relation.html">CommonRelation</a>&amp; common_relation = contact_common_relations[n];</div><div class="line"><a name="l00079"></a><span class="lineno">   79</span>&#160;                        <span class="keywordtype">size_t</span> index_particle_j = common_relation.<a class="code" href="class_s_p_h_1_1_common_relation.html#a7c8fa7c04fd21a9668feade22912115b">j_</a>;</div><div class="line"><a name="l00080"></a><span class="lineno">   80</span>&#160;                        <a class="code" href="class_s_p_h_1_1_base_particle_data.html">BaseParticleData</a>&amp; base_particle_data_j</div><div class="line"><a name="l00081"></a><span class="lineno">   81</span>&#160;                            = this-&gt;contact_particles_[k]-&gt;base_particle_data_[index_particle_j];</div><div class="line"><a name="l00082"></a><span class="lineno">   82</span>&#160;                        Real Vol_j = base_particle_data_j.<a class="code" href="class_s_p_h_1_1_base_particle_data.html#ae25734347aeb43d20fd21030ba052763">Vol_</a>;</div><div class="line"><a name="l00083"></a><span class="lineno">   83</span>&#160;                        TargetDataType&amp; target_data_j = target_data[index_particle_j];</div><div class="line"><a name="l00084"></a><span class="lineno">   84</span>&#160;</div><div class="line"><a name="l00085"></a><span class="lineno">   85</span>&#160;                        Real weight_j = kernel_value_list[n] * Vol_j;</div><div class="line"><a name="l00086"></a><span class="lineno">   86</span>&#160;                        observed_quantity += weight_j * target_data_j.*TrgtMemPtr;</div><div class="line"><a name="l00087"></a><span class="lineno">   87</span>&#160;                        ttl_weight += weight_j;</div><div class="line"><a name="l00088"></a><span class="lineno">   88</span>&#160;                    }</div><div class="line"><a name="l00089"></a><span class="lineno">   89</span>&#160;                }</div><div class="line"><a name="l00090"></a><span class="lineno">   90</span>&#160;                <a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_quantity.html#ac7c700df625fac6dfe6999301e4f83ad">observed_quantities_</a>[index_particle_i] = observed_quantity / (ttl_weight + TinyReal);</div><div class="line"><a name="l00091"></a><span class="lineno">   91</span>&#160;            };</div><div class="line"><a name="l00092"></a><span class="lineno">   92</span>&#160;        <span class="keyword">public</span>:</div><div class="line"><a name="l00093"></a><span class="lineno">   93</span>&#160;            <span class="keyword">explicit</span> <a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_quantity.html">ObservingAQuantity</a>(<a class="code" href="class_s_p_h_1_1_s_p_h_body_contact_relation.html">SPHBodyContactRelation</a>* body_contact_relation)</div><div class="line"><a name="l00094"></a><span class="lineno">   94</span>&#160;                : <a class="code" href="class_s_p_h_1_1_particle_dynamics_contact.html">ObservationDynamics</a>&lt;TargetParticlesType&gt;(body_contact_relation) {</div><div class="line"><a name="l00095"></a><span class="lineno">   95</span>&#160;                <span class="keywordflow">for</span> (<span class="keywordtype">size_t</span> i = 0; i &lt; this-&gt;body_-&gt;number_of_particles_; ++i) <a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_quantity.html#ac7c700df625fac6dfe6999301e4f83ad">observed_quantities_</a>.push_back(DataType(0));</div><div class="line"><a name="l00096"></a><span class="lineno">   96</span>&#160;            };</div><div class="line"><a name="l00097"></a><span class="lineno">   97</span>&#160;            <span class="keyword">virtual</span> ~ObservingAQuantity() {};</div><div class="line"><a name="l00098"></a><span class="lineno">   98</span>&#160;        };</div><div class="line"><a name="l00099"></a><span class="lineno">   99</span>&#160;</div><div class="line"><a name="l00104"></a><span class="lineno">  104</span>&#160;        <span class="keyword">template</span> &lt;<span class="keyword">class</span> DiffusionReactionParticlesType&gt;</div><div class="line"><a name="l00105"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_diffusion_reaction_quantity.html">  105</a></span>&#160;        <span class="keyword">class </span><a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_diffusion_reaction_quantity.html">ObservingADiffusionReactionQuantity</a> : <span class="keyword">public</span> <a class="code" href="class_s_p_h_1_1_particle_dynamics_contact.html">ObservationDynamics</a>&lt;DiffusionReactionParticlesType&gt;</div><div class="line"><a name="l00106"></a><span class="lineno">  106</span>&#160;        {</div><div class="line"><a name="l00107"></a><span class="lineno">  107</span>&#160;        <span class="keyword">protected</span>:</div><div class="line"><a name="l00109"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_diffusion_reaction_quantity.html#abd491fb2c15f232179787ccad6386656">  109</a></span>&#160;            <span class="keywordtype">size_t</span> <a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_diffusion_reaction_quantity.html#abd491fb2c15f232179787ccad6386656">species_index_</a>;</div><div class="line"><a name="l00110"></a><span class="lineno">  110</span>&#160;            <a class="code" href="classmap_3_01string_00_01size__t_01_4.html">map&lt;string, size_t&gt;</a> species_indexes_map_;</div><div class="line"><a name="l00112"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_diffusion_reaction_quantity.html#a8a10412badcd4f261d3587c4ee4a536b">  112</a></span>&#160;            StdLargeVec&lt;Real&gt;  <a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_diffusion_reaction_quantity.html#a8a10412badcd4f261d3587c4ee4a536b">observed_quantities_</a>;</div><div class="line"><a name="l00113"></a><span class="lineno">  113</span>&#160;</div><div class="line"><a name="l00114"></a><span class="lineno">  114</span>&#160;            <span class="keyword">virtual</span> <span class="keywordtype">void</span> ContactInteraction(<span class="keywordtype">size_t</span> index_particle_i, Real dt = 0.0)<span class="keyword"> override</span></div><div class="line"><a name="l00115"></a><span class="lineno">  115</span>&#160;<span class="keyword">            </span>{</div><div class="line"><a name="l00116"></a><span class="lineno">  116</span>&#160;                Real observed_quantity(0);</div><div class="line"><a name="l00117"></a><span class="lineno">  117</span>&#160;                Real ttl_weight(0);</div><div class="line"><a name="l00118"></a><span class="lineno">  118</span>&#160;                <span class="keywordflow">for</span> (<span class="keywordtype">size_t</span> k = 0; k &lt; this-&gt;<a class="code" href="class_s_p_h_1_1_particle_dynamics_with_contact_configurations.html#a8a73fe1f7d8c22453a3c91c702b18796">contact_configuration_</a>.size(); ++k)</div><div class="line"><a name="l00119"></a><span class="lineno">  119</span>&#160;                {</div><div class="line"><a name="l00120"></a><span class="lineno">  120</span>&#160;                    DiffusionReactionParticlesType* target_particles = this-&gt;contact_particles_[k];</div><div class="line"><a name="l00121"></a><span class="lineno">  121</span>&#160;                    StdLargeVec&lt;DiffusionReactionData&gt;&amp; target_data = target_particles-&gt;diffusion_reaction_data_;</div><div class="line"><a name="l00122"></a><span class="lineno">  122</span>&#160;</div><div class="line"><a name="l00123"></a><span class="lineno">  123</span>&#160;                    <a class="code" href="class_s_p_h_1_1_neighborhood.html">Neighborhood</a>&amp; contact_neighborhood</div><div class="line"><a name="l00124"></a><span class="lineno">  124</span>&#160;                        = this-&gt;<a class="code" href="class_s_p_h_1_1_particle_dynamics_with_contact_configurations.html#a8a73fe1f7d8c22453a3c91c702b18796">contact_configuration_</a>[k][index_particle_i];</div><div class="line"><a name="l00125"></a><span class="lineno">  125</span>&#160;                    <a class="code" href="namespace_s_p_h.html#a65e5947f1eaddb0ada85cefd554b8183">KernelValueList</a>&amp; kernel_value_list = contact_neighborhood.kernel_value_list_;</div><div class="line"><a name="l00126"></a><span class="lineno">  126</span>&#160;                    <a class="code" href="namespace_s_p_h.html#aa1b1a469a853a78ec95f6bf7b3ded9f4">CommonRelationList</a>&amp; contact_common_relations = contact_neighborhood.common_relation_list_;</div><div class="line"><a name="l00127"></a><span class="lineno">  127</span>&#160;                    <span class="keywordflow">for</span> (<span class="keywordtype">size_t</span> n = 0; n != contact_neighborhood.<a class="code" href="class_s_p_h_1_1_neighborhood.html#a1e2d0d9c7af09e2ee0e58903b171902d">current_size_</a>; ++n)</div><div class="line"><a name="l00128"></a><span class="lineno">  128</span>&#160;                    {</div><div class="line"><a name="l00129"></a><span class="lineno">  129</span>&#160;                        <a class="code" href="class_s_p_h_1_1_common_relation.html">CommonRelation</a>&amp; common_relation = contact_common_relations[n];</div><div class="line"><a name="l00130"></a><span class="lineno">  130</span>&#160;                        <span class="keywordtype">size_t</span> index_particle_j = common_relation.<a class="code" href="class_s_p_h_1_1_common_relation.html#a7c8fa7c04fd21a9668feade22912115b">j_</a>;</div><div class="line"><a name="l00131"></a><span class="lineno">  131</span>&#160;                        <a class="code" href="class_s_p_h_1_1_base_particle_data.html">BaseParticleData</a>&amp; base_particle_data_j</div><div class="line"><a name="l00132"></a><span class="lineno">  132</span>&#160;                            = this-&gt;contact_particles_[k]-&gt;base_particle_data_[index_particle_j];</div><div class="line"><a name="l00133"></a><span class="lineno">  133</span>&#160;                        Real Vol_j = base_particle_data_j.<a class="code" href="class_s_p_h_1_1_base_particle_data.html#ae25734347aeb43d20fd21030ba052763">Vol_</a>;</div><div class="line"><a name="l00134"></a><span class="lineno">  134</span>&#160;</div><div class="line"><a name="l00135"></a><span class="lineno">  135</span>&#160;                        Real weight_j = kernel_value_list[n] * Vol_j;</div><div class="line"><a name="l00136"></a><span class="lineno">  136</span>&#160;                        observed_quantity += weight_j * target_data[index_particle_j].species_n_[<a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_diffusion_reaction_quantity.html#abd491fb2c15f232179787ccad6386656">species_index_</a>];</div><div class="line"><a name="l00137"></a><span class="lineno">  137</span>&#160;                        ttl_weight += weight_j;</div><div class="line"><a name="l00138"></a><span class="lineno">  138</span>&#160;                    }</div><div class="line"><a name="l00139"></a><span class="lineno">  139</span>&#160;                    <a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_diffusion_reaction_quantity.html#a8a10412badcd4f261d3587c4ee4a536b">observed_quantities_</a>[index_particle_i] = observed_quantity / (ttl_weight + TinyReal);</div><div class="line"><a name="l00140"></a><span class="lineno">  140</span>&#160;                }</div><div class="line"><a name="l00141"></a><span class="lineno">  141</span>&#160;            };</div><div class="line"><a name="l00142"></a><span class="lineno">  142</span>&#160;        <span class="keyword">public</span>:</div><div class="line"><a name="l00143"></a><span class="lineno">  143</span>&#160;            <span class="keyword">explicit</span> <a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_diffusion_reaction_quantity.html">ObservingADiffusionReactionQuantity</a>(<span class="keywordtype">string</span> species_name, <a class="code" href="class_s_p_h_1_1_s_p_h_body_contact_relation.html">SPHBodyContactRelation</a>* body_contact_relation)</div><div class="line"><a name="l00144"></a><span class="lineno">  144</span>&#160;                : <a class="code" href="class_s_p_h_1_1_particle_dynamics_contact.html">ObservationDynamics</a>&lt;DiffusionReactionParticlesType&gt;(body_contact_relation) {</div><div class="line"><a name="l00145"></a><span class="lineno">  145</span>&#160;                species_indexes_map_ = this-&gt;contact_particles_[0]-&gt;getSpeciesIndexMap();</div><div class="line"><a name="l00146"></a><span class="lineno">  146</span>&#160;                <a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_diffusion_reaction_quantity.html#abd491fb2c15f232179787ccad6386656">species_index_</a> = species_indexes_map_[species_name];</div><div class="line"><a name="l00147"></a><span class="lineno">  147</span>&#160;                <span class="keywordflow">for</span> (<span class="keywordtype">size_t</span> i = 0; i &lt; this-&gt;body_-&gt;number_of_particles_; ++i) <a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_diffusion_reaction_quantity.html#a8a10412badcd4f261d3587c4ee4a536b">observed_quantities_</a>.push_back(0.0);</div><div class="line"><a name="l00148"></a><span class="lineno">  148</span>&#160;            };</div><div class="line"><a name="l00149"></a><span class="lineno">  149</span>&#160;            <span class="keyword">virtual</span> ~ObservingADiffusionReactionQuantity() {};</div><div class="line"><a name="l00150"></a><span class="lineno">  150</span>&#160;        };</div><div class="line"><a name="l00151"></a><span class="lineno">  151</span>&#160;</div><div class="line"><a name="l00156"></a><span class="lineno">  156</span>&#160;        <span class="keyword">template</span> &lt;<span class="keyword">class </span>DataType, <span class="keyword">class </span>ObserverParticlesType, <span class="keyword">class </span>ObserverDataType, <span class="keyword">class </span>TargetParticlesType, <span class="keyword">class </span>TargetDataType,</div><div class="line"><a name="l00157"></a><span class="lineno">  157</span>&#160;            StdLargeVec&lt;ObserverDataType&gt; ObserverParticlesType:: * ObrsvrDataMemPtr, StdLargeVec&lt;TargetDataType&gt; TargetParticlesType:: * TrgtDataMemPtr,</div><div class="line"><a name="l00158"></a><span class="lineno">  158</span>&#160;            DataType ObserverDataType:: * ObrsvrMemPtr, DataType TargetDataType:: * TrgtMemPtr&gt;</div><div class="line"><a name="l00159"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_quantity.html">  159</a></span>&#160;            <span class="keyword">class </span><a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_quantity.html">InterpolatingAQuantity</a> : <span class="keyword">public</span> <a class="code" href="class_s_p_h_1_1_particle_dynamics_contact.html">InterpolationDynamics</a>&lt;ObserverParticlesType, TargetParticlesType&gt;</div><div class="line"><a name="l00160"></a><span class="lineno">  160</span>&#160;        {</div><div class="line"><a name="l00161"></a><span class="lineno">  161</span>&#160;        <span class="keyword">protected</span>:</div><div class="line"><a name="l00162"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_quantity.html#af896f152e12a5318dca6d7e89e929f7b">  162</a></span>&#160;            <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_quantity.html#af896f152e12a5318dca6d7e89e929f7b">ContactInteraction</a>(<span class="keywordtype">size_t</span> index_particle_i, Real dt = 0.0)<span class="keyword"> override</span></div><div class="line"><a name="l00163"></a><span class="lineno">  163</span>&#160;<span class="keyword">            </span>{</div><div class="line"><a name="l00164"></a><span class="lineno">  164</span>&#160;                ObserverParticlesType* particles = this-&gt;particles_;</div><div class="line"><a name="l00165"></a><span class="lineno">  165</span>&#160;                StdLargeVec&lt;ObserverDataType&gt;&amp; observer_data = this-&gt;particles_-&gt;*ObrsvrDataMemPtr;</div><div class="line"><a name="l00166"></a><span class="lineno">  166</span>&#160;                ObserverDataType&amp; observer_data_i = observer_data[index_particle_i];</div><div class="line"><a name="l00167"></a><span class="lineno">  167</span>&#160;</div><div class="line"><a name="l00168"></a><span class="lineno">  168</span>&#160;                DataType observed_quantity(0);</div><div class="line"><a name="l00169"></a><span class="lineno">  169</span>&#160;                Real ttl_weight(0);</div><div class="line"><a name="l00171"></a><span class="lineno">  171</span>&#160;                <span class="keywordflow">for</span> (<span class="keywordtype">size_t</span> k = 0; k &lt; this-&gt;<a class="code" href="class_s_p_h_1_1_particle_dynamics_with_contact_configurations.html#a8a73fe1f7d8c22453a3c91c702b18796">contact_configuration_</a>.size(); ++k)</div><div class="line"><a name="l00172"></a><span class="lineno">  172</span>&#160;                {</div><div class="line"><a name="l00173"></a><span class="lineno">  173</span>&#160;                    TargetParticlesType* target_particles = this-&gt;contact_particles_[k];</div><div class="line"><a name="l00174"></a><span class="lineno">  174</span>&#160;                    StdLargeVec&lt;BaseParticleData&gt;&amp; target_base_particle_data = target_particles-&gt;base_particle_data_;</div><div class="line"><a name="l00175"></a><span class="lineno">  175</span>&#160;                    StdLargeVec&lt;TargetDataType&gt;&amp; target_data = target_particles-&gt;*TrgtDataMemPtr;</div><div class="line"><a name="l00176"></a><span class="lineno">  176</span>&#160;</div><div class="line"><a name="l00177"></a><span class="lineno">  177</span>&#160;                    <a class="code" href="class_s_p_h_1_1_neighborhood.html">Neighborhood</a>&amp; contact_neighborhood = this-&gt;<a class="code" href="class_s_p_h_1_1_particle_dynamics_with_contact_configurations.html#a8a73fe1f7d8c22453a3c91c702b18796">contact_configuration_</a>[k][index_particle_i];</div><div class="line"><a name="l00178"></a><span class="lineno">  178</span>&#160;                    <a class="code" href="namespace_s_p_h.html#a65e5947f1eaddb0ada85cefd554b8183">KernelValueList</a>&amp; kernel_value_list = contact_neighborhood.kernel_value_list_;</div><div class="line"><a name="l00179"></a><span class="lineno">  179</span>&#160;                    <a class="code" href="namespace_s_p_h.html#aa1b1a469a853a78ec95f6bf7b3ded9f4">CommonRelationList</a>&amp; contact_common_relations = contact_neighborhood.common_relation_list_;</div><div class="line"><a name="l00180"></a><span class="lineno">  180</span>&#160;                    <span class="keywordflow">for</span> (<span class="keywordtype">size_t</span> n = 0; n != contact_neighborhood.<a class="code" href="class_s_p_h_1_1_neighborhood.html#a1e2d0d9c7af09e2ee0e58903b171902d">current_size_</a>; ++n)</div><div class="line"><a name="l00181"></a><span class="lineno">  181</span>&#160;                    {</div><div class="line"><a name="l00182"></a><span class="lineno">  182</span>&#160;                        <a class="code" href="class_s_p_h_1_1_common_relation.html">CommonRelation</a>&amp; common_relation = contact_common_relations[n];</div><div class="line"><a name="l00183"></a><span class="lineno">  183</span>&#160;                        <span class="keywordtype">size_t</span> index_particle_j = common_relation.<a class="code" href="class_s_p_h_1_1_common_relation.html#a7c8fa7c04fd21a9668feade22912115b">j_</a>;</div><div class="line"><a name="l00184"></a><span class="lineno">  184</span>&#160;                        <a class="code" href="class_s_p_h_1_1_base_particle_data.html">BaseParticleData</a>&amp; base_particle_data_j = target_base_particle_data[index_particle_j];</div><div class="line"><a name="l00185"></a><span class="lineno">  185</span>&#160;                        Real Vol_j = base_particle_data_j.<a class="code" href="class_s_p_h_1_1_base_particle_data.html#ae25734347aeb43d20fd21030ba052763">Vol_</a>;</div><div class="line"><a name="l00186"></a><span class="lineno">  186</span>&#160;                        TargetDataType&amp; target_data_j = target_data[index_particle_j];</div><div class="line"><a name="l00187"></a><span class="lineno">  187</span>&#160;</div><div class="line"><a name="l00188"></a><span class="lineno">  188</span>&#160;                        Real weight_j = kernel_value_list[n] * Vol_j;</div><div class="line"><a name="l00189"></a><span class="lineno">  189</span>&#160;                        observed_quantity += weight_j * target_data_j.*TrgtMemPtr;</div><div class="line"><a name="l00190"></a><span class="lineno">  190</span>&#160;                        ttl_weight += weight_j;</div><div class="line"><a name="l00191"></a><span class="lineno">  191</span>&#160;                    }</div><div class="line"><a name="l00192"></a><span class="lineno">  192</span>&#160;                }</div><div class="line"><a name="l00193"></a><span class="lineno">  193</span>&#160;                observer_data_i.* ObrsvrMemPtr = observed_quantity / (ttl_weight + TinyReal);</div><div class="line"><a name="l00194"></a><span class="lineno">  194</span>&#160;            };</div><div class="line"><a name="l00195"></a><span class="lineno">  195</span>&#160;        <span class="keyword">public</span>:</div><div class="line"><a name="l00196"></a><span class="lineno">  196</span>&#160;            <span class="keyword">explicit</span> <a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_quantity.html">InterpolatingAQuantity</a>(<a class="code" href="class_s_p_h_1_1_s_p_h_body_contact_relation.html">SPHBodyContactRelation</a>* body_contact_relation)</div><div class="line"><a name="l00197"></a><span class="lineno">  197</span>&#160;                : <a class="code" href="class_s_p_h_1_1_particle_dynamics_contact.html">InterpolationDynamics</a>&lt;ObserverParticlesType, TargetParticlesType&gt;(body_contact_relation) {};</div><div class="line"><a name="l00198"></a><span class="lineno">  198</span>&#160;            <span class="keyword">virtual</span> ~InterpolatingAQuantity() {};</div><div class="line"><a name="l00199"></a><span class="lineno">  199</span>&#160;        };</div><div class="line"><a name="l00200"></a><span class="lineno">  200</span>&#160;</div><div class="line"><a name="l00205"></a><span class="lineno">  205</span>&#160;        <span class="keyword">template</span> &lt;<span class="keyword">class </span>ObserverParticlesType, <span class="keyword">class </span>ObserverDataType, <span class="keyword">class </span>DiffusionReactionParticlesType,</div><div class="line"><a name="l00206"></a><span class="lineno">  206</span>&#160;            StdLargeVec&lt;ObserverDataType&gt; ObserverParticlesType:: * ObrsvrDataMemPtr, <a class="code" href="class_real.html">Real</a> ObserverDataType:: * ObrsvrMemPtr&gt;</div><div class="line"><a name="l00207"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_diffusion_reaction_quantity.html">  207</a></span>&#160;            <span class="keyword">class </span><a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_diffusion_reaction_quantity.html">InterpolatingADiffusionReactionQuantity</a></div><div class="line"><a name="l00208"></a><span class="lineno">  208</span>&#160;            : <span class="keyword">public</span> <a class="code" href="class_s_p_h_1_1_particle_dynamics_contact.html">InterpolationDynamics</a>&lt;ObserverParticlesType, DiffusionReactionParticlesType&gt;</div><div class="line"><a name="l00209"></a><span class="lineno">  209</span>&#160;        {</div><div class="line"><a name="l00210"></a><span class="lineno">  210</span>&#160;        <span class="keyword">protected</span>:</div><div class="line"><a name="l00212"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_diffusion_reaction_quantity.html#a5eec060b0ee02f4d0da4f75f03eff2fa">  212</a></span>&#160;            <span class="keywordtype">size_t</span> <a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_diffusion_reaction_quantity.html#a5eec060b0ee02f4d0da4f75f03eff2fa">species_index_</a>;</div><div class="line"><a name="l00213"></a><span class="lineno">  213</span>&#160;            <a class="code" href="classmap_3_01string_00_01size__t_01_4.html">map&lt;string, size_t&gt;</a> species_indexes_map_;</div><div class="line"><a name="l00215"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_diffusion_reaction_quantity.html#a59a7da494fc4ad297c1295450e6993ae">  215</a></span>&#160;            StdLargeVec&lt;Real&gt;  <a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_diffusion_reaction_quantity.html#a59a7da494fc4ad297c1295450e6993ae">observed_quantities_</a>;</div><div class="line"><a name="l00216"></a><span class="lineno">  216</span>&#160;</div><div class="line"><a name="l00217"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_diffusion_reaction_quantity.html#a38845f1cd4105b6b9fc9e333f4508e37">  217</a></span>&#160;            <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_diffusion_reaction_quantity.html#a38845f1cd4105b6b9fc9e333f4508e37">ContactInteraction</a>(<span class="keywordtype">size_t</span> index_particle_i, Real dt = 0.0)<span class="keyword"> override</span></div><div class="line"><a name="l00218"></a><span class="lineno">  218</span>&#160;<span class="keyword">            </span>{</div><div class="line"><a name="l00219"></a><span class="lineno">  219</span>&#160; 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++k)</div><div class="line"><a name="l00227"></a><span class="lineno">  227</span>&#160;                {</div><div class="line"><a name="l00228"></a><span class="lineno">  228</span>&#160;                    DiffusionReactionParticlesType* target_particles = this-&gt;contact_particles_[k];</div><div class="line"><a name="l00229"></a><span class="lineno">  229</span>&#160;                    StdLargeVec&lt;BaseParticleData&gt;&amp; target_base_particle_data = target_particles-&gt;base_particle_data_;</div><div class="line"><a name="l00230"></a><span class="lineno">  230</span>&#160;                    StdLargeVec&lt;DiffusionReactionData&gt;&amp; target_diffusion_reaction_data = target_particles-&gt;diffusion_reaction_data_;</div><div class="line"><a name="l00231"></a><span class="lineno">  231</span>&#160;</div><div class="line"><a name="l00232"></a><span class="lineno">  232</span>&#160;                    <a class="code" href="class_s_p_h_1_1_neighborhood.html">Neighborhood</a>&amp; contact_neighborhood = this-&gt;<a class="code" href="class_s_p_h_1_1_particle_dynamics_with_contact_configurations.html#a8a73fe1f7d8c22453a3c91c702b18796">contact_configuration_</a>[k][index_particle_i];</div><div class="line"><a name="l00233"></a><span class="lineno">  233</span>&#160;                    <a class="code" href="namespace_s_p_h.html#a65e5947f1eaddb0ada85cefd554b8183">KernelValueList</a>&amp; kernel_value_list = contact_neighborhood.kernel_value_list_;</div><div class="line"><a name="l00234"></a><span class="lineno">  234</span>&#160;                    <a class="code" href="namespace_s_p_h.html#aa1b1a469a853a78ec95f6bf7b3ded9f4">CommonRelationList</a>&amp; contact_common_relations = contact_neighborhood.common_relation_list_;</div><div class="line"><a name="l00235"></a><span class="lineno">  235</span>&#160;                    <span class="keywordflow">for</span> (<span class="keywordtype">size_t</span> n = 0; n != contact_neighborhood.<a class="code" href="class_s_p_h_1_1_neighborhood.html#a1e2d0d9c7af09e2ee0e58903b171902d">current_size_</a>; ++n)</div><div class="line"><a name="l00236"></a><span class="lineno">  236</span>&#160;                    {</div><div class="line"><a name="l00237"></a><span class="lineno">  237</span>&#160;                        <a class="code" href="class_s_p_h_1_1_common_relation.html">CommonRelation</a>&amp; common_relation = contact_common_relations[n];</div><div class="line"><a name="l00238"></a><span class="lineno">  238</span>&#160;                        <span class="keywordtype">size_t</span> index_particle_j = common_relation.<a class="code" href="class_s_p_h_1_1_common_relation.html#a7c8fa7c04fd21a9668feade22912115b">j_</a>;</div><div class="line"><a name="l00239"></a><span class="lineno">  239</span>&#160;                        <a class="code" href="class_s_p_h_1_1_base_particle_data.html">BaseParticleData</a>&amp; base_particle_data_j = target_base_particle_data[index_particle_j];</div><div class="line"><a name="l00240"></a><span class="lineno">  240</span>&#160;                        Real Vol_j = base_particle_data_j.<a class="code" href="class_s_p_h_1_1_base_particle_data.html#ae25734347aeb43d20fd21030ba052763">Vol_</a>;</div><div class="line"><a name="l00241"></a><span class="lineno">  241</span>&#160;                        <a class="code" href="class_s_p_h_1_1_diffusion_reaction_data.html">DiffusionReactionData</a>&amp; target_data_j = target_diffusion_reaction_data[index_particle_j];</div><div class="line"><a name="l00242"></a><span class="lineno">  242</span>&#160;</div><div class="line"><a name="l00243"></a><span class="lineno">  243</span>&#160;                        Real weight_j = kernel_value_list[n] * Vol_j;</div><div class="line"><a name="l00244"></a><span class="lineno">  244</span>&#160;                        observed_quantity += weight_j * target_data_j.<a class="code" href="class_s_p_h_1_1_diffusion_reaction_data.html#a387eae85205f80dd35b898faee438ad5">species_n_</a>[<a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_diffusion_reaction_quantity.html#a5eec060b0ee02f4d0da4f75f03eff2fa">species_index_</a>];</div><div class="line"><a name="l00245"></a><span class="lineno">  245</span>&#160;                        ttl_weight += weight_j;</div><div class="line"><a name="l00246"></a><span class="lineno">  246</span>&#160;                    }</div><div class="line"><a name="l00247"></a><span class="lineno">  247</span>&#160;                }</div><div class="line"><a name="l00248"></a><span class="lineno">  248</span>&#160;                observer_data_i.*ObrsvrMemPtr = observed_quantity / (ttl_weight + TinyReal);</div><div class="line"><a name="l00249"></a><span class="lineno">  249</span>&#160;            };</div><div class="line"><a name="l00250"></a><span class="lineno">  250</span>&#160;        <span class="keyword">public</span>:</div><div class="line"><a name="l00251"></a><span class="lineno">  251</span>&#160;            <span class="keyword">explicit</span> <a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_diffusion_reaction_quantity.html">InterpolatingADiffusionReactionQuantity</a>(<span class="keywordtype">string</span> species_name, <a class="code" href="class_s_p_h_1_1_s_p_h_body_contact_relation.html">SPHBodyContactRelation</a>* body_contact_relation)</div><div class="line"><a name="l00252"></a><span class="lineno">  252</span>&#160;                : <a class="code" href="class_s_p_h_1_1_particle_dynamics_contact.html">InterpolationDynamics</a>&lt;ObserverParticlesType, DiffusionReactionParticlesType&gt;(body_contact_relation)</div><div class="line"><a name="l00253"></a><span class="lineno">  253</span>&#160;            {</div><div class="line"><a name="l00254"></a><span class="lineno">  254</span>&#160;                species_indexes_map_ = this-&gt;contact_particles_[0]-&gt;getSpeciesIndexMap();</div><div class="line"><a name="l00255"></a><span class="lineno">  255</span>&#160;                <a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_diffusion_reaction_quantity.html#a5eec060b0ee02f4d0da4f75f03eff2fa">species_index_</a> = species_indexes_map_[species_name];</div><div class="line"><a name="l00256"></a><span class="lineno">  256</span>&#160;            };</div><div class="line"><a name="l00257"></a><span class="lineno">  257</span>&#160;            <span class="keyword">virtual</span> ~InterpolatingADiffusionReactionQuantity() {};</div><div class="line"><a name="l00258"></a><span class="lineno">  258</span>&#160;        };</div><div class="line"><a name="l00259"></a><span class="lineno">  259</span>&#160;        </div><div class="line"><a name="l00264"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1observer__dynamics_1_1_correct_interpolation_kernel_weights.html">  264</a></span>&#160;        <span class="keyword">class </span><a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_correct_interpolation_kernel_weights.html">CorrectInterpolationKernelWeights</a> : </div><div class="line"><a name="l00265"></a><span class="lineno">  265</span>&#160;            <span class="keyword">public</span> <a class="code" href="class_s_p_h_1_1_particle_dynamics_contact.html">ParticleDynamicsContact</a>&lt;SPHBody, BaseParticles, BaseMaterial, SPHBody, BaseParticles, BaseMaterial&gt;</div><div class="line"><a name="l00266"></a><span class="lineno">  266</span>&#160;        {</div><div class="line"><a name="l00267"></a><span class="lineno">  267</span>&#160;        <span class="keyword">protected</span>:</div><div class="line"><a name="l00268"></a><span class="lineno">  268</span>&#160;            <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_correct_interpolation_kernel_weights.html#a33af18a4f10c5463e6285299d784cb87">ContactInteraction</a>(<span class="keywordtype">size_t</span> index_particle_i, Real dt = 0.0) <span class="keyword">override</span>;</div><div class="line"><a name="l00269"></a><span class="lineno">  269</span>&#160;        <span class="keyword">public</span>:</div><div class="line"><a name="l00270"></a><span class="lineno">  270</span>&#160;            <a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_correct_interpolation_kernel_weights.html">CorrectInterpolationKernelWeights</a>(<a class="code" href="class_s_p_h_1_1_s_p_h_body_contact_relation.html">SPHBodyContactRelation</a>* body_contact_relation)</div><div class="line"><a name="l00271"></a><span class="lineno">  271</span>&#160;                : <a class="code" href="class_s_p_h_1_1_particle_dynamics_contact.html">ParticleDynamicsContact</a>&lt;<a class="code" href="class_s_p_h_1_1_s_p_h_body.html">SPHBody</a>, <a class="code" href="class_s_p_h_1_1_base_particles.html">BaseParticles</a>, </div><div class="line"><a name="l00272"></a><span class="lineno">  272</span>&#160;                <a class="code" href="class_s_p_h_1_1_base_material.html">BaseMaterial</a>, <a class="code" href="class_s_p_h_1_1_s_p_h_body.html">SPHBody</a>, <a class="code" href="class_s_p_h_1_1_base_particles.html">BaseParticles</a>, <a class="code" href="class_s_p_h_1_1_base_material.html">BaseMaterial</a>&gt;(body_contact_relation) {};</div><div class="line"><a name="l00273"></a><span class="lineno">  273</span>&#160;            <span class="keyword">virtual</span> ~<a class="code" href="class_s_p_h_1_1observer__dynamics_1_1_correct_interpolation_kernel_weights.html">CorrectInterpolationKernelWeights</a>() {};</div><div class="line"><a name="l00274"></a><span class="lineno">  274</span>&#160;        };</div><div class="line"><a name="l00275"></a><span class="lineno">  275</span>&#160;    }</div><div class="line"><a name="l00276"></a><span class="lineno">  276</span>&#160;}</div><div class="ttc" id="class_s_p_h_1_1_neighborhood_html"><div class="ttname"><a href="class_s_p_h_1_1_neighborhood.html">SPH::Neighborhood</a></div><div class="ttdoc">A neighborhood around particle i. </div><div class="ttdef"><b>Definition:</b> neighbor_relation.h:77</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html">SPH::BaseParticles</a></div><div class="ttdoc">Particles with essential (geometric and kinematic) data. There are three types of particles...</div><div class="ttdef"><b>Definition:</b> base_particles.h:87</div></div>
<div class="ttc" id="class_s_p_h_1_1observer__dynamics_1_1_observing_a_diffusion_reaction_quantity_html"><div class="ttname"><a href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_diffusion_reaction_quantity.html">SPH::observer_dynamics::ObservingADiffusionReactionQuantity</a></div><div class="ttdoc">Observing a diffusion-reaction quantity from a body. </div><div class="ttdef"><b>Definition:</b> observer_dynamics.h:105</div></div>
<div class="ttc" id="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_quantity_html_af896f152e12a5318dca6d7e89e929f7b"><div class="ttname"><a href="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_quantity.html#af896f152e12a5318dca6d7e89e929f7b">SPH::observer_dynamics::InterpolatingAQuantity::ContactInteraction</a></div><div class="ttdeci">virtual void ContactInteraction(size_t index_particle_i, Real dt=0.0) override</div><div class="ttdef"><b>Definition:</b> observer_dynamics.h:162</div></div>
<div class="ttc" id="class_s_p_h_1_1observer__dynamics_1_1_observing_a_quantity_html"><div class="ttname"><a href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_quantity.html">SPH::observer_dynamics::ObservingAQuantity</a></div><div class="ttdoc">Observering a given member data in the particles of a general body. </div><div class="ttdef"><b>Definition:</b> observer_dynamics.h:56</div></div>
<div class="ttc" id="class_s_p_h_1_1_particle_dynamics_with_contact_configurations_html_a8a73fe1f7d8c22453a3c91c702b18796"><div class="ttname"><a href="class_s_p_h_1_1_particle_dynamics_with_contact_configurations.html#a8a73fe1f7d8c22453a3c91c702b18796">SPH::ParticleDynamicsWithContactConfigurations::contact_configuration_</a></div><div class="ttdeci">ContatcParticleConfiguration &amp; contact_configuration_</div><div class="ttdef"><b>Definition:</b> base_particle_dynamics.h:214</div></div>
<div class="ttc" id="class_s_p_h_1_1_neighborhood_html_a1e2d0d9c7af09e2ee0e58903b171902d"><div class="ttname"><a href="class_s_p_h_1_1_neighborhood.html#a1e2d0d9c7af09e2ee0e58903b171902d">SPH::Neighborhood::current_size_</a></div><div class="ttdeci">size_t current_size_</div><div class="ttdef"><b>Definition:</b> neighbor_relation.h:83</div></div>
<div class="ttc" id="class_s_p_h_1_1_common_relation_html"><div class="ttname"><a href="class_s_p_h_1_1_common_relation.html">SPH::CommonRelation</a></div><div class="ttdoc">The common relation for a particle j around particle i. </div><div class="ttdef"><b>Definition:</b> neighbor_relation.h:42</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_material_html"><div class="ttname"><a href="class_s_p_h_1_1_base_material.html">SPH::BaseMaterial</a></div><div class="ttdoc">Base of all materials. </div><div class="ttdef"><b>Definition:</b> base_material.h:53</div></div>
<div class="ttc" id="class_s_p_h_1_1_s_p_h_body_contact_relation_html"><div class="ttname"><a href="class_s_p_h_1_1_s_p_h_body_contact_relation.html">SPH::SPHBodyContactRelation</a></div><div class="ttdoc">The relation between a SPH body and its contact SPH bodies. </div><div class="ttdef"><b>Definition:</b> body_relation.h:82</div></div>
<div class="ttc" id="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_diffusion_reaction_quantity_html_a5eec060b0ee02f4d0da4f75f03eff2fa"><div class="ttname"><a href="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_diffusion_reaction_quantity.html#a5eec060b0ee02f4d0da4f75f03eff2fa">SPH::observer_dynamics::InterpolatingADiffusionReactionQuantity::species_index_</a></div><div class="ttdeci">size_t species_index_</div><div class="ttdef"><b>Definition:</b> observer_dynamics.h:212</div></div>
<div class="ttc" id="namespace_s_p_h_html_a65e5947f1eaddb0ada85cefd554b8183"><div class="ttname"><a href="namespace_s_p_h.html#a65e5947f1eaddb0ada85cefd554b8183">SPH::KernelValueList</a></div><div class="ttdeci">StdLargeVec&lt; Real &gt; KernelValueList</div><div class="ttdef"><b>Definition:</b> neighbor_relation.h:71</div></div>
<div class="ttc" id="class_real_html"><div class="ttname"><a href="class_real.html">Real</a></div></div>
<div class="ttc" id="class_s_p_h_1_1observer__dynamics_1_1_correct_interpolation_kernel_weights_html_a33af18a4f10c5463e6285299d784cb87"><div class="ttname"><a href="class_s_p_h_1_1observer__dynamics_1_1_correct_interpolation_kernel_weights.html#a33af18a4f10c5463e6285299d784cb87">SPH::observer_dynamics::CorrectInterpolationKernelWeights::ContactInteraction</a></div><div class="ttdeci">virtual void ContactInteraction(size_t index_particle_i, Real dt=0.0) override</div><div class="ttdef"><b>Definition:</b> observer_dynamics.cpp:18</div></div>
<div class="ttc" id="class_s_p_h_1_1observer__dynamics_1_1_observing_a_quantity_html_ac7c700df625fac6dfe6999301e4f83ad"><div class="ttname"><a href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_quantity.html#ac7c700df625fac6dfe6999301e4f83ad">SPH::observer_dynamics::ObservingAQuantity::observed_quantities_</a></div><div class="ttdeci">StdLargeVec&lt; DataType &gt; observed_quantities_</div><div class="ttdef"><b>Definition:</b> observer_dynamics.h:60</div></div>
<div class="ttc" id="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_quantity_html"><div class="ttname"><a href="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_quantity.html">SPH::observer_dynamics::InterpolatingAQuantity</a></div><div class="ttdoc">interpolate a given member data in the particles of a general body from another body ...</div><div class="ttdef"><b>Definition:</b> observer_dynamics.h:159</div></div>
<div class="ttc" id="classmap_3_01string_00_01size__t_01_4_html"><div class="ttname"><a href="classmap_3_01string_00_01size__t_01_4.html">map&lt; string, size_t &gt;</a></div></div>
<div class="ttc" id="class_s_p_h_1_1_diffusion_reaction_data_html"><div class="ttname"><a href="class_s_p_h_1_1_diffusion_reaction_data.html">SPH::DiffusionReactionData</a></div><div class="ttdoc">Particles data for general diffusion/reaction problems. </div><div class="ttdef"><b>Definition:</b> diffusion_reaction_particles.h:49</div></div>
<div class="ttc" id="class_s_p_h_1_1observer__dynamics_1_1_observing_a_diffusion_reaction_quantity_html_a8a10412badcd4f261d3587c4ee4a536b"><div class="ttname"><a href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_diffusion_reaction_quantity.html#a8a10412badcd4f261d3587c4ee4a536b">SPH::observer_dynamics::ObservingADiffusionReactionQuantity::observed_quantities_</a></div><div class="ttdeci">StdLargeVec&lt; Real &gt; observed_quantities_</div><div class="ttdef"><b>Definition:</b> observer_dynamics.h:112</div></div>
<div class="ttc" id="class_s_p_h_1_1observer__dynamics_1_1_correct_interpolation_kernel_weights_html"><div class="ttname"><a href="class_s_p_h_1_1observer__dynamics_1_1_correct_interpolation_kernel_weights.html">SPH::observer_dynamics::CorrectInterpolationKernelWeights</a></div><div class="ttdoc">correct kernel weights for interpolation between general bodies </div><div class="ttdef"><b>Definition:</b> observer_dynamics.h:264</div></div>
<div class="ttc" id="class_s_p_h_1_1_diffusion_reaction_data_html_a387eae85205f80dd35b898faee438ad5"><div class="ttname"><a href="class_s_p_h_1_1_diffusion_reaction_data.html#a387eae85205f80dd35b898faee438ad5">SPH::DiffusionReactionData::species_n_</a></div><div class="ttdeci">StdVec&lt; Real &gt; species_n_</div><div class="ttdef"><b>Definition:</b> diffusion_reaction_particles.h:54</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particle_data_html"><div class="ttname"><a href="class_s_p_h_1_1_base_particle_data.html">SPH::BaseParticleData</a></div><div class="ttdoc">A based particle with essential data for all types of particles. </div><div class="ttdef"><b>Definition:</b> base_particles.h:49</div></div>
<div class="ttc" id="class_s_p_h_1_1_common_relation_html_a7c8fa7c04fd21a9668feade22912115b"><div class="ttname"><a href="class_s_p_h_1_1_common_relation.html#a7c8fa7c04fd21a9668feade22912115b">SPH::CommonRelation::j_</a></div><div class="ttdeci">size_t j_</div><div class="ttdef"><b>Definition:</b> neighbor_relation.h:52</div></div>
<div class="ttc" id="class_s_p_h_1_1_particle_dynamics_contact_html"><div class="ttname"><a href="class_s_p_h_1_1_particle_dynamics_contact.html">SPH::ParticleDynamicsContact</a></div><div class="ttdoc">This is the class for contact interactions. </div><div class="ttdef"><b>Definition:</b> particle_dynamics_algorithms.h:161</div></div>
<div class="ttc" id="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_diffusion_reaction_quantity_html_a59a7da494fc4ad297c1295450e6993ae"><div class="ttname"><a href="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_diffusion_reaction_quantity.html#a59a7da494fc4ad297c1295450e6993ae">SPH::observer_dynamics::InterpolatingADiffusionReactionQuantity::observed_quantities_</a></div><div class="ttdeci">StdLargeVec&lt; Real &gt; observed_quantities_</div><div class="ttdef"><b>Definition:</b> observer_dynamics.h:215</div></div>
<div class="ttc" id="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_diffusion_reaction_quantity_html_a38845f1cd4105b6b9fc9e333f4508e37"><div class="ttname"><a href="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_diffusion_reaction_quantity.html#a38845f1cd4105b6b9fc9e333f4508e37">SPH::observer_dynamics::InterpolatingADiffusionReactionQuantity::ContactInteraction</a></div><div class="ttdeci">virtual void ContactInteraction(size_t index_particle_i, Real dt=0.0) override</div><div class="ttdef"><b>Definition:</b> observer_dynamics.h:217</div></div>
<div class="ttc" id="class_s_p_h_1_1_s_p_h_body_html"><div class="ttname"><a href="class_s_p_h_1_1_s_p_h_body.html">SPH::SPHBody</a></div><div class="ttdoc">SPHBody is a base body with basic data and functions. Its derived class can be a real fluid body...</div><div class="ttdef"><b>Definition:</b> base_body.h:73</div></div>
<div class="ttc" id="class_s_p_h_1_1observer__dynamics_1_1_observing_a_diffusion_reaction_quantity_html_abd491fb2c15f232179787ccad6386656"><div class="ttname"><a href="class_s_p_h_1_1observer__dynamics_1_1_observing_a_diffusion_reaction_quantity.html#abd491fb2c15f232179787ccad6386656">SPH::observer_dynamics::ObservingADiffusionReactionQuantity::species_index_</a></div><div class="ttdeci">size_t species_index_</div><div class="ttdef"><b>Definition:</b> observer_dynamics.h:109</div></div>
<div class="ttc" id="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_diffusion_reaction_quantity_html"><div class="ttname"><a href="class_s_p_h_1_1observer__dynamics_1_1_interpolating_a_diffusion_reaction_quantity.html">SPH::observer_dynamics::InterpolatingADiffusionReactionQuantity</a></div><div class="ttdoc">interpolate a diffusion-reaction member data in the particles of a general body from another body ...</div><div class="ttdef"><b>Definition:</b> observer_dynamics.h:207</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particle_data_html_ae25734347aeb43d20fd21030ba052763"><div class="ttname"><a href="class_s_p_h_1_1_base_particle_data.html#ae25734347aeb43d20fd21030ba052763">SPH::BaseParticleData::Vol_</a></div><div class="ttdeci">Real Vol_</div><div class="ttdef"><b>Definition:</b> base_particles.h:68</div></div>
<div class="ttc" id="namespace_s_p_h_html_aa1b1a469a853a78ec95f6bf7b3ded9f4"><div class="ttname"><a href="namespace_s_p_h.html#aa1b1a469a853a78ec95f6bf7b3ded9f4">SPH::CommonRelationList</a></div><div class="ttdeci">StdLargeVec&lt; CommonRelation &gt; CommonRelationList</div><div class="ttdef"><b>Definition:</b> neighbor_relation.h:69</div></div>
<div class="ttc" id="namespace_s_p_h_html"><div class="ttname"><a href="namespace_s_p_h.html">SPH</a></div><div class="ttdef"><b>Definition:</b> base_body_supplementary.cpp:11</div></div>
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